6KU9 | pdb_00006ku9

Structure of the African swine fever virus major capsid protein p72

• PDB DOI: https://doi.org/10.2210/pdb6KU9/pdb
• EM Map EMD-0776: EMDB EMDataResource

• Classification: VIRAL PROTEIN
• Organism(s): African swine fever virus
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2019-08-31 Released: 2019-09-25 
• Deposition Author(s): Liu, Q., Xiang, Y.
• Funding Organization(s): National Natural Science Foundation of China

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.67 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structure of the African swine fever virus major capsid protein p72.

Liu, Q., Ma, B., Qian, N., Zhang, F., Tan, X., Lei, J., Xiang, Y.

(2019) Cell Res 29: 953-955

• PubMed: 31530894 
• DOI: https://doi.org/10.1038/s41422-019-0232-x
• Primary Citation of Related Structures:  
  6KU9

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Organizational Affiliation: 
• Beijing Advanced Innovation Center for Structural Biology, Beijing Frontier Research Center for Biological Structure, Center for Infectious Disease Research, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Tsinghua University-Peking University Joint Center for Life Sciences, Beijing, China.
Beijing Advanced Innovation Center for Structural Biology, Beijing Frontier Research Center for Biological Structure, School of Pharmaceutical Science, Tsinghua University, Beijing, 100084, China.
Beijing Advanced Innovation Center for Structural Biology, Beijing Frontier Research Center for Biological Structure, School of Life Science, Tsinghua University, Beijing, 100084, China.
Beijing Advanced Innovation Center for Structural Biology, Beijing Frontier Research Center for Biological Structure, Center for Infectious Disease Research, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China. [e-mail].

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 236.79 kDa 
• Atom Count: 11,739 
• Modeled Residue Count: 1,461 
• Deposited Residue Count: 2,079 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
B646L	A, B, C	693	African swine fever virus	Mutation(s): 0  Gene Names: p72, B646L, B646L CDS, ASFV-Georgia_4-106
UniProt
Find proteins for P22776 (African swine fever virus (strain Badajoz 1971 Vero-adapted)) Explore P22776  Go to UniProtKB:  P22776

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.67 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2019-09-25 
Deposition Author(s): Liu, Q., Xiang, Y.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China	China	--

Revision History  

• Version 1.0: 2019-09-25
  Type: Initial release
  
• Version 1.1: 2019-11-06
  Changes: Data collection, Other
• Version 1.2: 2019-11-20
  Changes: Database references
• Version 1.3: 2024-03-27
  Changes: Data collection, Database references