6KHT | pdb_00006kht

Chimeric beta-glucosidase Cel1b-H13

PDB DOI: https://doi.org/10.2210/pdb6KHT/pdb

Classification: HYDROLASE
Organism(s): Trichoderma reesei QM6a
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2019-07-16 Released: 2021-01-20
Deposition Author(s): Niu, K.L.
Funding Organization(s): National Science Foundation (China)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.31 Å
R-Value Free:
0.237 (Depositor), 0.240 (DCC)
R-Value Work:
0.174 (Depositor), 0.180 (DCC)
R-Value Observed:
0.177 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Chimeric beta-glucosidase Cel1b-H13

Niu, K.L.

To be published.

Macromolecule Content

Total Structure Weight: 175.88 kDa
Atom Count: 11,529
Modeled Residue Count: 1,431
Deposited Residue Count: 1,539
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glycoside hydrolase family 1	A, B, C	513	Trichoderma reesei QM6a	Mutation(s): 0 Gene Names: cel1b, TRIREDRAFT_22197 EC: 3.2.1.21
UniProt
Find proteins for G0RIF5 (Hypocrea jecorina (strain QM6a)) Explore G0RIF5 Go to UniProtKB: G0RIF5
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	G0RIF5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.31 Å
R-Value Free: 0.237 (Depositor), 0.240 (DCC)
R-Value Work: 0.174 (Depositor), 0.180 (DCC)
R-Value Observed: 0.177 (Depositor)

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 108.58	α = 90
b = 182.393	β = 90
c = 210.507	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
Coot	model building
PHENIX	refinement

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2021-01-20

Deposition Author(s):

Funding Organization	Location	Grant Number
National Science Foundation (China)	China	2018YFA0901700

Revision History (Full details and data files)

Version 1.0: 2021-01-20
Type: Initial release
Version 1.1: 2023-11-22
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.