Download MendeleyStructure of Rice OTUB_like in complex with Ubiquitin at 2.047 Angstroms
Lu, L.N., Liu, L., Wang, F.To be published.
6K9P
Structure of Deubiquitinase
- DOI: 10.2210/pdb6K9P/pdb
- Classification: HYDROLASE
- Organism(s): Oryza sativa Japonica Group, Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2019-06-17 Released: 2020-06-24
- Funding Organization(s): National Science Foundation (China)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.210
- R-Value Work: 0.172
- R-Value Observed: 0.174
wwPDB Validation 3D Report Full Report
Literature
Macromolecules
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(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquitin thioesterase | B | 253 | Oryza sativa Japonica Group | Mutation(s): 0 Gene Names: OsJ_28104 EC: 3.4.19.12 |  |
Find proteins for B9G207 (Oryza sativa subsp. japonica) Explore B9G207 Go to UniProtKB: B9G207 | |||||
Protein Feature ViewExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.210
- R-Value Work: 0.172
- R-Value Observed: 0.174
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 48.897 | α = 90 |
| b = 75.342 | β = 92.63 |
| c = 50.52 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| HKL-3000 | phasing |
