6K8A

RGLG1 VWA domain with MIDAS is occupied by water


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.177 
  • R-Value Observed: 0.179 

wwPDB Validation 3D Report Full Report



Literature

RGLG1 VWA domain with MIDAS is occupied by water

Wang, Q.Wu, Y.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
E3 ubiquitin-protein ligase RGLG1A, B301Arabidopsis thalianaMutation(s): 0 
Gene Names: RGLG1At3g01650F4P13.19
EC: 2.3.2.27
Find proteins for Q9SS90 (Arabidopsis thaliana)
Explore Q9SS90 
Go to UniProtKB:  Q9SS90
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download CCD File 
A, B
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.177 
  • R-Value Observed: 0.179 
  • Space Group: P 41
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 136.28α = 90
b = 136.28β = 90
c = 55.37γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
xia2data scaling
PDB_EXTRACTdata extraction
xia2data reduction
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2019-06-11 
  • Released Date: 2020-06-24 
  • Deposition Author(s): Wang, Q., Wu, Y.

Revision History 

  • Version 1.0: 2020-06-24
    Type: Initial release