6K81

Crystal structure of human VASH1-SVBP complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.28 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.192 

wwPDB Validation   3D Report Full Report



Literature

Structural insights into tubulin detyrosination by vasohibins-SVBP complex.

Liu, X.Wang, H.Zhu, J.Xie, Y.Liang, X.Chen, Z.Feng, Y.Zhang, Y.

(2019) Cell Discov 5: 65-65


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Tubulinyl-Tyr carboxypeptidase 1 A365Homo sapiensMutation(s): 0 
Gene Names: VASH1KIAA1036VASH
EC: 3.4.17.17
Find proteins for Q7L8A9 (Homo sapiens)
Explore Q7L8A9 
Go to UniProtKB:  Q7L8A9
NIH Common Fund Data Resources
PHAROS:  Q7L8A9
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Small vasohibin-binding protein B66Homo sapiensMutation(s): 0 
Gene Names: SVBPCCDC23
Find proteins for Q8N300 (Homo sapiens)
Explore Q8N300 
Go to UniProtKB:  Q8N300
NIH Common Fund Data Resources
PHAROS:  Q8N300
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.28 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.192 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 70.452α = 90
b = 128.995β = 90
c = 44.54γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
SCALEPACKdata scaling
AutoSolphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina31822012

Revision History 

  • Version 1.0: 2020-02-19
    Type: Initial release