6JQN

Structure of PaaZ, a bifunctional enzyme in complex with NADP+ and OCoA


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.1 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway

Gakher, L.Vinothkumar, K.R.Katagihallimath, N.Sowdhamini, R.Sathyanarayanan, N.Cannone, G.

(2019) Nat Commun --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Bifunctional protein PaaZ
A, B, C, D, E, F
688Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: paaZ (maoC, ydbN)
Find proteins for P77455 (Escherichia coli (strain K12))
Go to UniProtKB:  P77455
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAP
Query on NAP

Download SDF File 
Download CCD File 
A, B, C, D, E, F
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
 Ligand Interaction
CO8
Query on CO8

Download SDF File 
Download CCD File 
A, B, C, D, E, F
OCTANOYL-COENZYME A
C29 H50 N7 O17 P3 S
KQMZYOXOBSXMII-CECATXLMSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.1 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Biotechnology (India)IndiaDBT/PR12422/MED/31/287/2014
Council of Scientific & Industrial ResearchIndiaCSIR/37/1606/13/EMR-II
Department of Biotechnology (India)IndiaBT/PR5081/INF/22/156/2012
Medical Research Council (United Kingdom)United KingdomU105184322

Revision History 

  • Version 1.0: 2019-09-11
    Type: Initial release