6JHO

The complex crystal structure of Cagbeta with CagZ revealed a novel regulatory mechanism for T4SS coupling ATPase in Helicobacter pylori


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.192 

wwPDB Validation 3D Report Full Report



Literature

The complex crystal structure of Cagbeta with CagZ revealed a novel regulatory mechanism in VirD4 coupling ATPase

Wu, X.Zhao, Y.Sun, L.Ye, R.Wu, Y.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Cag pathogenicity island protein (Cag6)AB208Helicobacter pylori 26695Mutation(s): 0 
Gene Names: HP_0526
Find proteins for O25261 (Helicobacter pylori (strain ATCC 700392 / 26695))
Explore O25261 
Go to UniProtKB:  O25261
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Cag pathogenicity island protein (Cag5)CD210Helicobacter pylori 26695Mutation(s): 0 
Gene Names: HP_0524
Find proteins for O25260 (Helicobacter pylori (strain ATCC 700392 / 26695))
Explore O25260 
Go to UniProtKB:  O25260
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.191 
  • R-Value Observed: 0.192 
  • Space Group: P 41 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 96.298α = 90
b = 96.298β = 90
c = 212.658γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
HKL-3000data reduction
PHENIXphasing

Structure Validation

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Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2020-02-19
    Type: Initial release