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Download EndnoteCrystal structure of a methionine transporter protein
Jha, B., Vyas, R., Bhushan, J., Sehgal, D., Biswal, B.K.To be published.
6JF1
Crystal structure of the substrate binding protein of a methionine transporter from Streptococcus pneumoniae
- DOI: 10.2210/pdb6JF1/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
- Expression System: Escherichia coli
- Deposited: 2019-02-07 Released: 2019-07-10
- Funding Organization(s): Department of Biotechnology (India)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.231
- R-Value Work: 0.183
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Lipoprotein | A | 276 | Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) | Mutation(s): 0 |
Find proteins for A0A0H2UN92 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)) Go to UniProtKB: A0A0H2UN92 | ||||
Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | A | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| ACT Query on ACT | A | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | Ligand Interaction | |
| CL Query on CL | A | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| GOL Query on GOL | A | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| MET Query on MET | A | METHIONINE C5 H11 N O2 S FFEARJCKVFRZRR-BYPYZUCNSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.231
- R-Value Work: 0.183
- Space Group: P 21 21 21
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 54.692 | α = 90.00 |
| b = 75.851 | β = 90.00 |
| c = 75.634 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data scaling |
| HKL-2000 | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Deposited Date: 2019-02-07
- Released Date: 2019-07-10
- Deposition Author(s): Jha, B., Vyas, R., Bhushan, J., Sehgal, D., Biswal, B.K.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Department of Biotechnology (India) | India | -- |
