Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

Standalone Viewers  
Protein Workshop | Ligand Explorer

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 30077.76 
• Atom Count: 1955 
• Residue Count: 262 
• Unique protein chains: 1

6JDP

the imm52 family protein TsiT (PA3908) from Pseudomonas aeruginosa

• DOI: 10.2210/pdb6JDP/pdb

• Classification: ANTITOXIN
• Organism(s): Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
• Expression System: Escherichia coli BL21(DE3)


• Deposited: 2019-02-02 Released: 2019-03-20 
• Deposition Author(s): She, Z.
• Funding Organization(s): National Natural Science Foundation of China 

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.601 Å
• R-Value Free: 0.220 
• R-Value Work: 0.187 

Literature

Structural characterization of the Imm52 family protein TsiT in Pseudomonas aeruginosa.

She, Z., Geng, Z., Xu, J.H., Li, Y.H., Dong, Y.H.

(2019) Protein Sci. --: --

• PubMed: 30834616 

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Imm52 family protein	A	262	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	Mutation(s): 0
Find proteins for Q9HXA5 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Go to UniProtKB:  Q9HXA5

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
PO4	A	PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K
NA	A	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.601 Å
• R-Value Free: 0.220 
• R-Value Work: 0.187 
• Space Group: H 3

Unit Cell:

Length (Å)	Angle (°)
a = 86.960	α = 90.00
b = 86.960	β = 90.00
c = 81.108	γ = 120.00

Software Package:

Software Name	Purpose
HKL-3000	data reduction
AutoSol	phasing
PHENIX	refinement
HKL-3000	data scaling

Structure Validation

Entry History & Funding Information

Deposition Data

• Deposited Date: 2019-02-02 
• Released Date: 2019-03-20 
• Deposition Author(s): She, Z.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China	China	31700651

Revision History 

• Version 1.0: 2019-03-20
  Type: Initial release