Download MendeleyCrystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
Lee, J.-G., Eom, S.H.To be published.
6JB7
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
- DOI: 10.2210/pdb6JB7/pdb
- Classification: LIGASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2019-01-25 Released: 2019-03-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.250
- R-Value Work: 0.215
- R-Value Observed: 0.218
wwPDB Validation 3D Report Full Report
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquitin | B | 76 | Homo sapiens | Mutation(s): 0 Gene Names: UBB |  |
Find proteins for P0CG47 (Homo sapiens) Explore P0CG47 Go to UniProtKB: P0CG47 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: P0CG47 | |||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquitin-conjugating enzyme E2 K | A | 200 | Homo sapiens | Mutation(s): 2 Gene Names: UBE2K, HIP2, LIG EC: 2.3.2.23 |  |
Find proteins for P61086 (Homo sapiens) Explore P61086 Go to UniProtKB: P61086 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: P61086 GTEx: ENSG00000078140 | |||||
Protein Feature ViewExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.250
- R-Value Work: 0.215
- R-Value Observed: 0.218
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 146.088 | α = 90 |
| b = 38.124 | β = 90.899 |
| c = 60.266 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Deposited Date: 2019-01-25
- Released Date: 2019-03-20 Deposition Author(s): Lee, J.-G., Youn, H.-S., Lee, Y., An, J.Y., Park, K.R., Kang, J.Y., Mun, S.A., Park, J., Park, T., Jin, M.W., Yang, J., Eom, S.H.
