6J1K

Crystal structure of ribose-5-phosphate isomerase A from Ochrobactrum sp. CSL1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.82 Å
  • R-Value Free: 0.287 
  • R-Value Work: 0.236 
  • R-Value Observed: 0.238 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of ribose-5-phosphate isomerase A from Ochrobactrum sp. CSL1

Xu, X.Q.Mo, X.B.Ju, X.Shen, M.Li, L.Z.Yuan, A.Y.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Ribose-5-phosphate isomerase AA, B232Ochrobactrum sp.Mutation(s): 0 
EC: 5.3.1.6
UniProt
Find proteins for A6X0Q4 (Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / JCM 21032 / NBRC 15819 / NCTC 12168))
Explore A6X0Q4 
Go to UniProtKB:  A6X0Q4
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PEG
Query on PEG

Download Ideal Coordinates CCD File 
C [auth A]DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.82 Å
  • R-Value Free: 0.287 
  • R-Value Work: 0.236 
  • R-Value Observed: 0.238 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 69.817α = 90
b = 169.262β = 90
c = 41.268γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data collection
HKL-2000data scaling
HKL-2000data reduction
SHARPphasing

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina21376156
National Natural Science Foundation of ChinaChina21676173

Revision History  (Full details and data files)

  • Version 1.0: 2019-04-17
    Type: Initial release