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Download EndnoteQuaternary Structure Analysis of a Hemoglobin Core in Hemoglobin-Albumin Cluster
Morita, Y., Yamada, T., Kureishi, M., Kihira, K., Komatsu, T.(2018) J Phys Chem B --: --
- PubMed: 30444368
- Primary Citation of Related Structures:
6II1
Crystal Structure Analysis of CO form hemoglobin from Bos taurus
- DOI: 10.2210/pdb6II1/pdb
- Classification: OXYGEN TRANSPORT
- Organism(s): Bos taurus
- Deposited: 2018-10-03 Released: 2018-12-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.34 Å
- R-Value Free: 0.175
- R-Value Work: 0.137
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Hemoglobin subunit alpha | A, C | 138 | Bos taurus | Mutation(s): 0 Gene Names: HBA |
Find proteins for P01966 (Bos taurus) Go to UniProtKB: P01966 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Hemoglobin subunit beta | B, D | 145 | Bos taurus | Mutation(s): 0 Gene Names: HBB |
Find proteins for P02070 (Bos taurus) Go to Gene View: HBB Go to UniProtKB: P02070 | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEM Query on HEM | A, B, C, D | PROTOPORPHYRIN IX CONTAINING FE HEME C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | Ligand Interaction | |
| CMO Query on CMO | A, B, C, D | CARBON MONOXIDE C O UGFAIRIUMAVXCW-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.34 Å
- R-Value Free: 0.175
- R-Value Work: 0.137
- Space Group: P 21 21 21
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 63.560 | α = 90.00 |
| b = 76.283 | β = 90.00 |
| c = 109.789 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| PHASER | phasing |
| Aimless | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Deposited Date: 2018-10-03
- Released Date: 2018-12-12
- Deposition Author(s): Kihira, K., Morita, Y., Yamada, T., Kureishi, M., Komatsu, T.
Revision History
- Version 1.0: 2018-12-12
Type: Initial release
