6I6L

Papaver somniferum O-methyltransferase 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.29 Å
  • R-Value Free: 0.158 
  • R-Value Work: 0.124 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure of Papaver somniferum O-Methyltransferase 1 Reveals Initiation of Noscapine Biosynthesis with Implications for Plant Natural Product Methylation

Cabry, M.P.Offen, W.A.Winzer, T.H.Li, Y.Graham, I.A.Davies, G.J.Saleh, P.

(2019) Acs Catalysis --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
O-methyltransferase 1
A, B
393Papaver somniferumMutation(s): 2 
Gene Names: MT1
Find proteins for I3PLQ5 (Papaver somniferum)
Go to UniProtKB:  I3PLQ5
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SAH
Query on SAH

Download SDF File 
Download CCD File 
A, B
S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
 Ligand Interaction
H68
Query on H68

Download SDF File 
Download CCD File 
A, B
Tetrahydrocolumbamine
C20 H23 N O4
KDFKJOFJHSVROC-INIZCTEOSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.29 Å
  • R-Value Free: 0.158 
  • R-Value Work: 0.124 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 68.221α = 90.00
b = 75.942β = 101.62
c = 76.571γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
MOLREPphasing
xia2data reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited KingdomBB/M011151/1

Revision History 

  • Version 1.0: 2019-03-27
    Type: Initial release
  • Version 1.1: 2019-04-10
    Type: Data collection, Database references