6HY9

THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT Q193M


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.227 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.

Hu, H.Ataka, K.Menny, A.Fourati, Z.Sauguet, L.Corringer, P.J.Koehl, P.Heberle, J.Delarue, M.

(2018) Proc. Natl. Acad. Sci. U.S.A. 115: E12172-E12181


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Proton-gated ion channel
A, B, C, D, E
317Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)Mutation(s): 1 
Gene Names: glvI
Find proteins for Q7NDN8 (Gloeobacter violaceus (strain ATCC 29082 / PCC 7421))
Go to UniProtKB:  Q7NDN8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A, B, C, D, E
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
LMT
Query on LMT

Download SDF File 
Download CCD File 
D
DODECYL-BETA-D-MALTOSIDE
C24 H46 O11
NLEBIOOXCVAHBD-QKMCSOCLSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.227 
  • R-Value Work: 0.203 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 181.990α = 90.00
b = 134.360β = 101.47
c = 159.180γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
BUSTERphasing
BUSTERrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-10-19 
  • Released Date: 2018-12-19 
  • Deposition Author(s): Hu, H.D., Delarue, M.

Revision History 

  • Version 1.0: 2018-12-19
    Type: Initial release
  • Version 1.1: 2018-12-26
    Type: Data collection, Database references
  • Version 1.2: 2019-01-09
    Type: Data collection, Database references