6HS5

N-terminal domain including the conserved ImpA_N region of the TssA component of the type VI secretion system from Burkholderia cenocepacia


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.177 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural insights into the function of type VI secretion system TssA subunits.

Dix, S.R.Owen, H.J.Sun, R.Ahmad, A.Shastri, S.Spiewak, H.L.Mosby, D.J.Harris, M.J.Batters, S.L.Brooker, T.A.Tzokov, S.B.Sedelnikova, S.E.Baker, P.J.Bullough, P.A.Rice, D.W.Thomas, M.S.

(2018) Nat Commun 9: 4765-4765


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
TssA
A
275Burkholderia cenocepaciaMutation(s): 0 
Find proteins for A0A1V2W6E8 (Burkholderia cenocepacia)
Go to UniProtKB:  A0A1V2W6E8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.177 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 49.670α = 90.00
b = 125.740β = 90.00
c = 45.560γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SHELXCDphasing
xia2data reduction
xia2data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited KingdomBB/J014443/1
Biotechnology and Biological Sciences Research CouncilUnited KingdomBB/F016840/1
Higher Education Funding Council for England (HEFCE)United KingdomR/151699

Revision History 

  • Version 1.0: 2018-11-21
    Type: Initial release