6HL7

Crystal structure of truncated aspartate transcarbamoylase from Plasmodium falciparum with mutated active site (R109A/K138A) and N-carbamoyl-L-phosphate bound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Drug target validation of aspartate transcarbamoylase from Plasmodium falciparum

Bosch, S.S.Lunev, S.Batista, F.A.Groves, M.R.Wrenger, C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aspartate transcarbamoylase
A, B, C
348Plasmodium falciparumMutation(s): 2 
Gene Names: ATCase
EC: 2.1.3.2
Find proteins for O15804 (Plasmodium falciparum)
Go to UniProtKB:  O15804
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CP
Query on CP

Download SDF File 
Download CCD File 
A, C
PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
C H4 N O5 P
FFQKYPRQEYGKAF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.204 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 148.001α = 90.00
b = 89.715β = 122.17
c = 121.642γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
REFMACrefinement
DIMPLEmodel building
PDB_EXTRACTdata extraction
EDNAdata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Sao Paulo Research FoundationBrazil2013/10288-1
Sao Paulo Research FoundationBrazil2013/17577-9

Revision History 

  • Version 1.0: 2018-09-26
    Type: Initial release
  • Version 1.1: 2018-10-10
    Type: Data collection, Database references