6HHK

Structure of gp105 of Listeria bacteriophage A511


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure and transformation of bacteriophage A511 baseplate and tail upon infection ofListeriacells.

Guerrero-Ferreira, R.C.Hupfeld, M.Nazarov, S.Taylor, N.M.Shneider, M.M.Obbineni, J.M.Loessner, M.J.Ishikawa, T.Klumpp, J.Leiman, P.G.

(2019) EMBO J. 38: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Gp105
A, B, C
193Listeria phage A511Mutation(s): 0 
Find proteins for A8AST9 (Listeria phage A511)
Go to UniProtKB:  A8AST9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.204 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 75.143α = 90.00
b = 75.143β = 90.00
c = 187.303γ = 120.00
Software Package:
Software NamePurpose
BUSTERrefinement
XDSdata scaling
XDSdata reduction
SHELXDEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swiss National Science FoundationSwitzerland31003A_146284/1

Revision History 

  • Version 1.0: 2019-01-23
    Type: Initial release
  • Version 1.1: 2019-02-13
    Type: Data collection, Database references