6HAR

Crystal structure of Mesotrypsin in complex with APPI-M17C/I18F/F34C


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.497 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.169 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Disulfide engineering of human Kunitz-type serine protease inhibitors enhances proteolytic stability and target affinity toward mesotrypsin.

Cohen, I.Coban, M.Shahar, A.Sankaran, B.Hockla, A.Lacham, S.Caulfield, T.R.Radisky, E.S.Papo, N.

(2019) J. Biol. Chem. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PRSS3 protein
A
224Homo sapiensMutation(s): 0 
Gene Names: PRSS3
Find proteins for Q8N2U3 (Homo sapiens)
Go to Gene View: PRSS3
Go to UniProtKB:  Q8N2U3
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Amyloid-beta A4 protein
E
80Homo sapiensMutation(s): 3 
Gene Names: APP
Find proteins for H7C0V9 (Homo sapiens)
Go to Gene View: APP
Go to UniProtKB:  H7C0V9
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.497 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.169 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 34.091α = 90.00
b = 82.781β = 93.63
c = 46.559γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
US-Israel Binational Science Foundation (BSF)2015134

Revision History 

  • Version 1.0: 2019-02-06
    Type: Initial release
  • Version 1.1: 2019-02-13
    Type: Data collection, Database references