6H9S

Crystal dimeric structure of Petrotoga mobilis lactate dehydrogenase with NADH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.197 
  • R-Value Work: 0.169 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of Petrotoga mobilis lactate dehydrogenase at 1.9 Angstrom resolution

Roche, J.Engilberge, S.Girard, E.Madern, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
L-lactate dehydrogenase
A, B
307Petrotoga mobilis (strain DSM 10674 / SJ95)Mutation(s): 0 
Gene Names: ldh
EC: 1.1.1.27
Find proteins for A9BGZ9 (Petrotoga mobilis (strain DSM 10674 / SJ95))
Go to UniProtKB:  A9BGZ9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAD
Query on NAD

Download SDF File 
Download CCD File 
A, B
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.197 
  • R-Value Work: 0.169 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 91.268α = 90.00
b = 103.739β = 107.25
c = 90.700γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
PHASERphasing
PHENIXrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
France--

Revision History 

  • Version 1.0: 2018-08-22
    Type: Initial release