6H25

Human nuclear RNA exosome EXO-10-MPP6 complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.8 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Distinct and evolutionary conserved structural features of the human nuclear exosome complex.

Gerlach, P.Schuller, J.M.Bonneau, F.Basquin, J.Reichelt, P.Falk, S.Conti, E.

(2018) Elife 7: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP45
A
443Homo sapiensMutation(s): 0 
Gene Names: EXOSC9 (PMSCL1)
Find proteins for Q06265 (Homo sapiens)
Go to Gene View: EXOSC9
Go to UniProtKB:  Q06265
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP41
B
249Homo sapiensMutation(s): 0 
Gene Names: EXOSC4 (RRP41, SKI6)
Find proteins for Q9NPD3 (Homo sapiens)
Go to Gene View: EXOSC4
Go to UniProtKB:  Q9NPD3
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP43
C
278Homo sapiensMutation(s): 0 
Gene Names: EXOSC8 (OIP2, RRP43)
Find proteins for Q96B26 (Homo sapiens)
Go to Gene View: EXOSC8
Go to UniProtKB:  Q96B26
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP46
D
237Homo sapiensMutation(s): 0 
Gene Names: EXOSC5 (CML28, RRP46)
Find proteins for Q9NQT4 (Homo sapiens)
Go to Gene View: EXOSC5
Go to UniProtKB:  Q9NQT4
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP42
E
295Homo sapiensMutation(s): 0 
Gene Names: EXOSC7 (KIAA0116, RRP42)
Find proteins for Q15024 (Homo sapiens)
Go to Gene View: EXOSC7
Go to UniProtKB:  Q15024
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component MTR3
F
276Homo sapiensMutation(s): 0 
Gene Names: EXOSC6 (MTR3)
Find proteins for Q5RKV6 (Homo sapiens)
Go to Gene View: EXOSC6
Go to UniProtKB:  Q5RKV6
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP40
G
293Homo sapiensMutation(s): 0 
Gene Names: EXOSC3 (RRP40)
Find proteins for Q9NQT5 (Homo sapiens)
Go to Gene View: EXOSC3
Go to UniProtKB:  Q9NQT5
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component RRP4
H
297Homo sapiensMutation(s): 0 
Gene Names: EXOSC2 (RRP4)
Find proteins for Q13868 (Homo sapiens)
Go to Gene View: EXOSC2
Go to UniProtKB:  Q13868
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetails
Exosome complex component CSL4
I
199Homo sapiensMutation(s): 0 
Gene Names: EXOSC1 (CSL4)
Find proteins for Q9Y3B2 (Homo sapiens)
Go to Gene View: EXOSC1
Go to UniProtKB:  Q9Y3B2
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetails
Exosome complex exonuclease RRP44
J
962Homo sapiensMutation(s): 2 
Gene Names: DIS3 (KIAA1008, RRP44)
EC: 3.1.13.-, 3.1.26.-
Find proteins for Q9Y2L1 (Homo sapiens)
Go to Gene View: DIS3
Go to UniProtKB:  Q9Y2L1
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetails
M-phase phosphoprotein 6
K
166Homo sapiensMutation(s): 0 
Gene Names: MPHOSPH6 (MPP6)
Find proteins for Q99547 (Homo sapiens)
Go to Gene View: MPHOSPH6
Go to UniProtKB:  Q99547
Entity ID: 12
MoleculeChainsLengthOrganism
U44 ssRNAR44synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.8 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Molecular Biology OrganizationALTF 1008-2015
European CommissionERC-2016-ADG 740329 EXORICO
German Research FoundationSFB646, SFB1035, GRK1721
Louis-Jeantet Foundation--
Max Planck Society--

Revision History 

  • Version 1.0: 2018-08-15
    Type: Initial release