6H06

FAB CBTAU-22.1 IN COMPLEX WITH TAU PEPTIDE V1088-5


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.216 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Enhancement of therapeutic potential of a naturally occurring human antibody targeting a phosphorylated Ser422containing epitope on pathological tau.

van Ameijde, J.Crespo, R.Janson, R.Juraszek, J.Siregar, B.Verveen, H.Sprengers, I.Nahar, T.Hoozemans, J.J.Steinbacher, S.Willems, R.Delbroek, L.Borgers, M.Dockx, K.Van Kolen, K.Mercken, M.Pascual, G.Koudstaal, W.Apetri, A.

(2018) Acta Neuropathol Commun 6: 59-59


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
HUMAN FAB ANTIBODY FRAGMENT OF CBTAU-22.1
H, A, C, E
224N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
HUMAN FAB ANTIBODY FRAGMENT OF HCBTAU-22.1
L, B, D, F
219N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Microtubule-associated protein tau
I, G, J, K
26Homo sapiensMutation(s): 0 
Gene Names: MAPT (MAPTL, MTBT1, TAU)
Find proteins for P10636 (Homo sapiens)
Go to Gene View: MAPT
Go to UniProtKB:  P10636
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B, D, F, L
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  3 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
G, I, J, K
L-PEPTIDE LINKINGC3 H8 N O6 PSER
PCA
Query on PCA
A, C, E, H
L-PEPTIDE LINKINGC5 H7 N O3GLU
TPO
Query on TPO
G, I, J, K
L-PEPTIDE LINKINGC4 H10 N O6 PTHR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.216 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 108.055α = 90.00
b = 96.209β = 112.81
c = 108.984γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
MOLREPphasing
XSCALEdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-07-25
    Type: Initial release