6GS6

Cyclophilin A single mutant D66A in complex with an inhibitor.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.16 Å
  • R-Value Free: 0.170 
  • R-Value Work: 0.150 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Atomic Level Characterisation of Millisecond Time Scale Protein Motions through a Combined Molecular Simulations and NMR Approach.

Juarez-Jimenez, J.Gupta, A.A.Karunanithy, G.May, A.Georgiou, C.Ioannidis, H.De Simone, A.Barlow, P.N.Hulme, A.N.Walkinshaw, M.D.Baldwin, A.Michel, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Peptidyl-prolyl cis-trans isomerase A
A
165Homo sapiensMutation(s): 1 
Gene Names: PPIA (CYPA)
EC: 5.2.1.8
Find proteins for P62937 (Homo sapiens)
Go to Gene View: PPIA
Go to UniProtKB:  P62937
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DMS
Query on DMS

Download SDF File 
Download CCD File 
A
DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
 Ligand Interaction
EA4
Query on EA4

Download SDF File 
Download CCD File 
A
ethyl N-[(4-aminobenzyl)carbamoyl]glycinate
C12 H17 N3 O3
UCMPTJMHPJQEED-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.16 Å
  • R-Value Free: 0.170 
  • R-Value Work: 0.150 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 63.010α = 90.00
b = 63.010β = 90.00
c = 94.720γ = 120.00
Software Package:
Software NamePurpose
REFMACphasing
pointlessdata scaling
REFMACrefinement
xia2data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research CouncilUnited KingdomNo. 336289

Revision History 

  • Version 1.0: 2019-06-26
    Type: Initial release