6GFN

METTL16 MTase domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.86 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.181 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Methylation of Structured RNA by the m6A Writer METTL16 Is Essential for Mouse Embryonic Development.

Mendel, M.Chen, K.M.Homolka, D.Gos, P.Pandey, R.R.McCarthy, A.A.Pillai, R.S.

(2018) Mol. Cell 71: 986-1000.e11


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase
A
291Homo sapiensMutation(s): 0 
Gene Names: METTL16 (METT10D)
Find proteins for Q86W50 (Homo sapiens)
Go to Gene View: METTL16
Go to UniProtKB:  Q86W50
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SAH
Query on SAH

Download SDF File 
Download CCD File 
A
S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 92.360α = 90.00
b = 92.360β = 90.00
c = 180.650γ = 90.00
Software Package:
Software NamePurpose
AutoPROCdata scaling
STARANISOdata scaling
BUSTERrefinement
PHASERphasing
Aimlessdata scaling
MxCuBEdata collection
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swiss National Science FoundationSwitzerlandGermMethylation and Origin-of-pi

Revision History 

  • Version 1.0: 2018-09-19
    Type: Initial release
  • Version 1.1: 2018-10-03
    Type: Data collection, Database references