6GCN

Truncated FtsH from A. aeolicus in R32


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.949 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.213 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Conformational flexibility of pore loop-1 gives insights into substrate translocation by the AAA+protease FtsH.

Uthoff, M.Baumann, U.

(2018) J. Struct. Biol. 204: 199-206


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ATP-dependent zinc metalloprotease FtsH
A, B, C, D
479Aquifex aeolicus (strain VF5)Mutation(s): 0 
Gene Names: ftsH
EC: 3.4.24.-
Find proteins for O67077 (Aquifex aeolicus (strain VF5))
Go to UniProtKB:  O67077
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B, C, D
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
ADP
Query on ADP

Download SDF File 
Download CCD File 
A, B, C, D
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
ALA
Query on ALA

Download SDF File 
Download CCD File 
B
ALANINE
C3 H7 N O2
QNAYBMKLOCPYGJ-REOHCLBHSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.949 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.213 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 197.550α = 90.00
b = 197.550β = 90.00
c = 323.920γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
XSCALEdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-08-22
    Type: Initial release
  • Version 1.1: 2018-08-29
    Type: Data collection, Database references
  • Version 1.2: 2018-10-10
    Type: Data collection, Database references