Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
short-chain variable fragment
A
250N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Nuclear body protein SP140
B
198Homo sapiensMutation(s): 0 
Gene Names: SP140 (LYSP100)
Find proteins for Q13342 (Homo sapiens)
Go to Gene View: SP140
Go to UniProtKB:  Q13342
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.74 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.226 
  • Space Group: P 61 2 2
Unit Cell:
Length (Å)Angle (°)
a = 89.200α = 90.00
b = 89.200β = 90.00
c = 343.350γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
xia2data scaling
PHASERphasing
xia2data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2018-04-18
    Type: Initial release
  • Version 1.1: 2019-01-16
    Type: Data collection, Derived calculations, Structure summary