6G3N

Mycobacterial hydrolase complex 14.

• PDB DOI: https://doi.org/10.2210/pdb6G3N/pdb

• Classification: HYDROLASE
• Organism(s): Mycolicibacterium hassiacum DSM 44199
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2018-03-26 Released: 2019-04-10 
• Deposition Author(s): Cereija, T.B., Macedo-Ribeiro, S., Pereira, P.J.B.
• Funding Organization(s): Fundacao para a Ciencia e a Tecnologia (FCT), Norte Portugal Regional Operational Programme NORTE 2020

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.32 Å
• R-Value Free: 0.203 
• R-Value Work: 0.153 
• R-Value Observed: 0.155 

Literature

Structural characterization of mycobacterial hydrolase

Cereija, T.B., Alarico, S., Lourenco, E.C., Ventura, R., Empadinhas, N., Macedo-Ribeiro, S., Pereira, P.J.B.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 102.81 kDa 
• Atom Count: 7,503 
• Modelled Residue Count: 890 
• Deposited Residue Count: 896 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mycobacterial hydrolase	A, B	448	Mycolicibacterium hassiacum DSM 44199	Mutation(s): 1  Gene Names: C731_0006
UniProt
Find proteins for K5BDL0 (Mycolicibacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)) Explore K5BDL0  Go to UniProtKB:  K5BDL0

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SER	G [auth A], K [auth B]	SERINE C3 H7 N O3 MTCFGRXMJLQNBG-REOHCLBHSA-N
GOL	C [auth A], D [auth A], E [auth A], F [auth A], H [auth B], I [auth B], J [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.32 Å
• R-Value Free: 0.203 
• R-Value Work: 0.153 
• R-Value Observed: 0.155 
• Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 85.585	α = 90
b = 158.835	β = 90
c = 88.274	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2019-04-10 
Deposition Author(s): Cereija, T.B., Macedo-Ribeiro, S., Pereira, P.J.B.

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Funding Organization	Location	Grant Number
Fundacao para a Ciencia e a Tecnologia (FCT)	Portugal	POCI-01-0145-FEDER-007274
Norte Portugal Regional Operational Programme NORTE 2020	Portugal	Norte-01-0145-FEDER-000012

Revision History  

• Version 1.0: 2019-04-10
  Type: Initial release
  
• Version 1.1: 2024-01-17
  Changes: Data collection, Database references, Refinement description