6G1T

TraN, a repressor of an Enterococcus conjugative type IV secretion system


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.181 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

TraN: A novel repressor of an Enterococcus conjugative type IV secretion system.

Kohler, V.Goessweiner-Mohr, N.Aufschnaiter, A.Fercher, C.Probst, I.Pavkov-Keller, T.Hunger, K.Wolinski, H.Buttner, S.Grohmann, E.Keller, W.

(2018) Nucleic Acids Res. 46: 9201-9219


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
AM32
A
122Enterococcus faecalisMutation(s): 0 
Find proteins for Q7BVV5 (Enterococcus faecalis)
Go to UniProtKB:  Q7BVV5
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (34-MER)E34Plasmid pIP501
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (34-MER)D34Plasmid pIP501
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EPE
Query on EPE

Download SDF File 
Download CCD File 
A
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.181 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 122.770α = 90.00
b = 44.170β = 90.86
c = 56.460γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
Aimlessdata scaling
XDSdata reduction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Austrian Science FundAustriaP27383

Revision History 

  • Version 1.0: 2018-07-25
    Type: Initial release
  • Version 1.1: 2018-08-15
    Type: Data collection, Database references
  • Version 1.2: 2018-10-10
    Type: Data collection, Database references