6G1O

Structure of Pseudomonas aeruginosa Isocitrate Lyase, ICL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.882 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Gluconeogenic precursor availability regulates flux through the glyoxylate shunt inPseudomonas aeruginosa.

Crousilles, A.Dolan, S.K.Brear, P.Chirgadze, D.Y.Welch, M.

(2018) J. Biol. Chem. 293: 14260-14269


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Isocitrate lyase
A
486Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Mutation(s): 0 
EC: 4.1.3.1
Find proteins for Q9I0K4 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Go to UniProtKB:  Q9I0K4
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
GLV
Query on GLV

Download SDF File 
Download CCD File 
A
GLYOXYLIC ACID
GLYOXALATE, GLYOXYLATE
C2 H2 O3
HHLFWLYXYJOTON-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.882 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.174 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 80.943α = 90.00
b = 116.023β = 90.00
c = 128.533γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
MOSFLMdata reduction
PDB_EXTRACTdata extraction
SCALAdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited Kingdom--

Revision History 

  • Version 1.0: 2018-08-01
    Type: Initial release
  • Version 1.1: 2018-08-29
    Type: Data collection, Database references
  • Version 1.2: 2018-09-26
    Type: Data collection, Database references