6G0B

Crystal Structure of a GH8 xylotriose complex from Teredinibacter Turnerae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.197 
  • R-Value Work: 0.167 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure and function of a glycoside hydrolase family 8 endoxylanase from Teredinibacter turnerae.

Fowler, C.A.Hemsworth, G.R.Cuskin, F.Hart, S.Turkenburg, J.Gilbert, H.J.Walton, P.H.Davies, G.J.

(2018) Acta Crystallogr D Struct Biol 74: 946-955


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glycoside hydrolase family 8 domain protein
A
399Teredinibacter turnerae (strain ATCC 39867 / T7901)Mutation(s): 0 
EC: 3.2.1.-
Find proteins for C5BJ89 (Teredinibacter turnerae (strain ATCC 39867 / T7901))
Go to UniProtKB:  C5BJ89
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
XYP
Query on XYP

Download SDF File 
Download CCD File 
A
BETA-D-XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-KKQCNMDGSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.197 
  • R-Value Work: 0.167 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 59.721α = 90.00
b = 80.522β = 90.00
c = 87.986γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
Aimlessdata scaling
xia2data reduction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited KingdomBB/L001926/1

Revision History 

  • Version 1.0: 2018-10-10
    Type: Initial release
  • Version 1.1: 2018-10-17
    Type: Data collection, Database references