6FRX

PKA variant as Aurora B mimic in complex with a dianilinopyrimidine inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.191 

wwPDB Validation 3D Report Full Report



Literature

PKA variant as Aurora B mimic in complex with a dianilinopyrimidine inhibitor

Engh, R.A.Kazi, A.A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
cAMP-dependent protein kinase catalytic subunit alpha
A
351Homo sapiensMutation(s): 0 
Gene Names: PRKACAPKACA
EC: 2.7.11.11
Find proteins for P17612 (Homo sapiens)
Go to UniProtKB:  P17612
NIH Common Fund Data Resources
PHAROS  P17612
  • Find similar proteins by: Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
cAMP-dependent protein kinase inhibitor alpha
B
20Homo sapiensMutation(s): 0 
Gene Names: PKIAPRKACN1
Find proteins for P61925 (Homo sapiens)
Go to UniProtKB:  P61925
NIH Common Fund Data Resources
PHAROS  P61925
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
E3Z
Query on E3Z

Download CCD File 
A
~{N}-[3-[(5-chloranyl-2-phenylazanyl-pyrimidin-4-yl)amino]phenyl]prop-2-enamide
C19 H16 Cl N5 O
SLKFAKHADUAFCQ-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
A
L-PEPTIDE LINKINGC3 H8 N O6 PSER
TPO
Query on TPO
A
L-PEPTIDE LINKINGC4 H10 N O6 PTHR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.191 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 58.743α = 90
b = 77.784β = 90
c = 96.484γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2018-02-16 
  • Released Date: 2019-03-13 
  • Deposition Author(s): Engh, R.A., Kazi, A.A.

Revision History 

  • Version 1.0: 2019-03-13
    Type: Initial release