6FP6

Complex of human Cu,Zn SOD1 with the human copper chaperone for SOD1 in a compact conformation


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Free: 0.230 
  • R-Value Work: 0.189 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A single methyl group orchestrates hCCS-Catalysed SOD1 maturation

Sala, F.A.Wright, G.S.A.Antonyuk, S.V.Garratt, R.C.Hasnain, S.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Superoxide dismutase [Cu-Zn]
A, C, E, G, I, K, M, O, Q, S, U, W
153Homo sapiensMutation(s): 2 
Gene Names: SOD1
EC: 1.15.1.1
Find proteins for P00441 (Homo sapiens)
Go to Gene View: SOD1
Go to UniProtKB:  P00441
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Copper chaperone for superoxide dismutase
B, D, F, H, J, L, N, P, R, T, V, X
274Homo sapiensMutation(s): 3 
Gene Names: CCS
Find proteins for O14618 (Homo sapiens)
Go to Gene View: CCS
Go to UniProtKB:  O14618
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
PPI
Query on PPI

Download SDF File 
Download CCD File 
A, I, K, R
PROPANOIC ACID
C3 H6 O2
XBDQKXXYIPTUBI-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Free: 0.230 
  • R-Value Work: 0.189 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 181.054α = 90.00
b = 181.054β = 90.00
c = 141.102γ = 120.00
Software Package:
Software NamePurpose
SCALAdata scaling
MOLREPphasing
XDSdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Motor Neurone Disease AssociationUnited KingdomHasnain/Apr15/833-791
Medical Research Council (United Kingdom)United KingdomMRF-060-0002-RG-HASNA
Sao Paulo Research FundationBrazil2015/00062-1
Sao Paulo Research FundationBrazil2016/24686-7
National Council for Scientific and Technological DevelopmentBrazil407438/2013-0

Revision History 

  • Version 1.0: 2019-01-30
    Type: Initial release