6FIX

antitoxin GraA in complex with its operator


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.8 Å
  • R-Value Free: 0.286 
  • R-Value Work: 0.246 

wwPDB Validation 3D Report Full Report


This is version 2.0 of the entry. See complete history

Literature

A dual role in regulation and toxicity for the intrinsically disordered N-terminus of the toxin GraT

Talavera, A.Loris, R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
XRE family transcriptional regulator
A, B, D, E
105Pseudomonas putidaMutation(s): 0 
Find proteins for A0A179R2V1 (Pseudomonas putida)
Go to UniProtKB:  A0A179R2V1
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (30-MER)C31Pseudomonas putida
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (30-MER)F30Pseudomonas putida
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.8 Å
  • R-Value Free: 0.286 
  • R-Value Work: 0.246 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 105.550α = 90.00
b = 105.550β = 90.00
c = 149.940γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Fonds voor Wetenschappelijk Onderzoek VlaanderenBelgiumG.0135.15N, GOC1213N, G.0090.11N
Vrije Universiteit BrusselBelgiumOZR2232 to SH, SPR13
BioStruct-XBelgium1673, 6131

Revision History 

  • Version 1.0: 2019-01-30
    Type: Initial release
  • Version 2.0: 2019-02-06
    Type: Data collection, Derived calculations, Polymer sequence, Structure summary