6FIT

FHIT-TRANSITION STATE ANALOG


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.291 
  • R-Value Work: 0.228 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structure-based analysis of catalysis and substrate definition in the HIT protein family.

Lima, C.D.Klein, M.G.Hendrickson, W.A.

(1997) Science 278: 286-290

  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • The histidine triad (HIT) protein family is among the most ubiquitous and highly conserved in nature, but a biological activity has not yet been identified for any member of the HIT family. Fragile histidine triad protein (FHIT) and protein kinase C ...

    The histidine triad (HIT) protein family is among the most ubiquitous and highly conserved in nature, but a biological activity has not yet been identified for any member of the HIT family. Fragile histidine triad protein (FHIT) and protein kinase C interacting protein (PKCI) were used in a structure-based approach to elucidate characteristics of in vivo ligands and reactions. Crystallographic structures of apo, substrate analog, pentacovalent transition-state analog, and product states of both enzymes reveal a catalytic mechanism and define substrate characteristics required for catalysis, thus unifying the HIT family as nucleotidyl hydrolases, transferases, or both. The approach described here may be useful in identifying structure-function relations between protein families identified through genomics.


    Related Citations: 
    • MAD Analysis of Fhit, a Putative Human Tumor Suppressor from the Hit Protein Family
      Lima, C.D.,D'Amico, K.L.,Naday, I.,Rosenbaum, G.,Westbrook, E.M.,Hendrickson, W.A.
      (1997) Structure 5: 763


    Organizational Affiliation

    Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
FRAGILE HISTIDINE TRIAD PROTEIN
A
147Homo sapiensMutation(s): 0 
Gene Names: FHIT
EC: 3.6.1.29
Find proteins for P49789 (Homo sapiens)
Go to Gene View: FHIT
Go to UniProtKB:  P49789
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
AMW
Query on AMW

Download SDF File 
Download CCD File 
A
ADENOSINE MONOTUNGSTATE
C10 H14 N5 O7 W
FJSJQPRHXPUMLC-KWIZKVQNSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.291 
  • R-Value Work: 0.228 
  • Space Group: P 61 2 2
Unit Cell:
Length (Å)Angle (°)
a = 50.700α = 90.00
b = 50.700β = 90.00
c = 267.000γ = 120.00
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
X-PLORphasing
DENZOdata reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1998-03-25
    Type: Initial release
  • Version 1.1: 2008-03-25
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance