6F6Y

Crystal structure of galectin-3 CRD in complex with galactopentaose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.41 Å
  • R-Value Free: 0.153 
  • R-Value Work: 0.116 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Beta-(1-4)-d-galactans: synthesis and binding interactions with galectin-3

Andersen, M.C.F.Boos, I.Kinnaert, C.Awan, S.I.Pedersen, H.L.Kracun, S.K.Lanz, G.Rydahl, M.G.Kjaerulff, L.Hakansson, M.Kimbung, R.Logan, D.T.Gotfredsen, C.H.Willats, W.G.T.Clausen, M.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Galectin-3
A
138Homo sapiensMutation(s): 0 
Gene Names: LGALS3 (MAC2)
Find proteins for P17931 (Homo sapiens)
Go to Gene View: LGALS3
Go to UniProtKB:  P17931
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GAL
Query on GAL

Download SDF File 
Download CCD File 
A
BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.41 Å
  • R-Value Free: 0.153 
  • R-Value Work: 0.116 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 36.060α = 90.00
b = 58.200β = 90.00
c = 62.990γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
XSCALEdata scaling
XDSdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Danish Council for Strategic ResearchDenmarkGlycAct

Revision History 

  • Version 1.0: 2018-12-19
    Type: Initial release