6EYH

Structure of a OpuBC mutant with bound Glycine betaine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.210 
  • R-Value Work: 0.169 
  • R-Value Observed: 0.171 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure of a OpuBC mutant with bound DMSP

Peherstorfer, S.Teichmann, L.Smits, S.H.Schmitt, L.Bremer, E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Choline binding protein OpuBCA306Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: opuBCproXBSU33710
UniProt
Find proteins for Q45462 (Bacillus subtilis (strain 168))
Explore Q45462 
Go to UniProtKB:  Q45462
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ45462
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DQY
Query on DQY

Download Ideal Coordinates CCD File 
B [auth A]3-(dimethyl-lambda~4~-sulfanyl)propanoic acid
C5 H12 O2 S
BBSYGEAKHYDEGI-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.210 
  • R-Value Work: 0.169 
  • R-Value Observed: 0.171 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 29.77α = 90
b = 65.89β = 92.14
c = 63.58γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2018-11-21
    Type: Initial release