6ETJ

HUMAN PFKFB3 IN COMPLEX WITH KAN0438241


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Targeting PFKFB3 radiosensitizes cancer cells and suppresses homologous recombination.

Gustafsson, N.M.S.Farnegardh, K.Bonagas, N.Ninou, A.H.Groth, P.Wiita, E.Jonsson, M.Hallberg, K.Lehto, J.Pennisi, R.Martinsson, J.Norstrom, C.Hollers, J.Schultz, J.Andersson, M.Markova, N.Marttila, P.Kim, B.Norin, M.Olin, T.Helleday, T.

(2018) Nat Commun 9: 3872-3872


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3
A
520Homo sapiensMutation(s): 0 
Gene Names: PFKFB3
Find proteins for Q16875 (Homo sapiens)
Go to Gene View: PFKFB3
Go to UniProtKB:  Q16875
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BWW
Query on BWW

Download SDF File 
Download CCD File 
A
4-[[3-(5-fluoranyl-2-oxidanyl-phenyl)phenyl]sulfonylamino]-2-oxidanyl-benzoic acid
C19 H14 F N O6 S
DDVUKRHRMBDQTD-UHFFFAOYSA-N
 Ligand Interaction
ADP
Query on ADP

Download SDF File 
Download CCD File 
A
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
DMS
Query on DMS

Download SDF File 
Download CCD File 
A
DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
 Ligand Interaction
F6P
Query on F6P

Download SDF File 
Download CCD File 
A
FRUCTOSE-6-PHOSPHATE
C6 H13 O9 P
BGWGXPAPYGQALX-ARQDHWQXSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
NEP
Query on NEP
A
L-PEPTIDE LINKINGC6 H10 N3 O5 PHIS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.192 
  • Space Group: P 65 2 2
Unit Cell:
Length (Å)Angle (°)
a = 103.774α = 90.00
b = 103.774β = 90.00
c = 259.563γ = 120.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
XSCALEdata scaling
XSCALEdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2018-11-07
    Type: Initial release