6ERM

HIV Hexamer with ligand


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.180 
  • R-Value Observed: 0.183 

wwPDB Validation 3D Report Full Report



Literature

HIV hexamer

James, L.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Gag polyproteinA219Human immunodeficiency virus 1Mutation(s): 0 
Gene Names: gag
Find proteins for B6DRA0 (Human immunodeficiency virus 1)
Explore B6DRA0 
Go to UniProtKB:  B6DRA0
Protein Feature View
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
AZT
Query on AZT

Download CCD File 
A
3'-AZIDO-3'-DEOXYTHYMIDINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
GLWHPRRGGYLLRV-XLPZGREQSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.180 
  • R-Value Observed: 0.183 
  • Space Group: P 6
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 91.039α = 90
b = 91.039β = 90
c = 56.534γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2017-10-18 
  • Released Date: 2018-11-07 
  • Deposition Author(s): James, L.C.

Revision History 

  • Version 1.0: 2018-11-07
    Type: Initial release