6EF7

GspB Siglec domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.03 Å
  • R-Value Free: 0.141 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.126 

wwPDB Validation   3D Report Full Report



Literature

GspB Siglec domain

Iverson, T.M.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Platelet binding protein GspBA127Streptococcus gordoniiMutation(s): 0 
Gene Names: gspB
Find proteins for Q939N5 (Streptococcus gordonii)
Explore Q939N5 
Go to UniProtKB:  Q939N5
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.03 Å
  • R-Value Free: 0.141 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.126 
  • Space Group: P 21 21 21
  • Diffraction Data DOI: 10.15785/SBGRID/812 SBGrid
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 33.92α = 90
b = 46.21β = 90
c = 72.97γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2018-08-16 
  • Released Date: 2020-02-19 
  • Deposition Author(s): Iverson, T.M.

Revision History 

  • Version 1.0: 2020-02-19
    Type: Initial release