6EC3

Crystal Structure of EvdMO1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.35 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.221 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains.

Starbird, C.A.Perry, N.A.Chen, Q.Berndt, S.Yamakawa, I.Loukachevitch, L.V.Limbrick, E.M.Bachmann, B.O.Iverson, T.M.McCulloch, K.M.

(2018) Biochemistry 57: 6827-6837


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Methyltransferase domain-containing protein
A, B, C
471Micromonospora carbonaceaMutation(s): 0 
Find proteins for A0A1C5AE13 (Micromonospora carbonacea)
Go to UniProtKB:  A0A1C5AE13
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BTB
Query on BTB

Download SDF File 
Download CCD File 
A, B, C
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
BIS-TRIS BUFFER
C8 H19 N O5
OWMVSZAMULFTJU-UHFFFAOYSA-N
 Ligand Interaction
NI
Query on NI

Download SDF File 
Download CCD File 
A, B, C
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.35 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.221 
  • Space Group: I 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 191.633α = 90.00
b = 191.633β = 90.00
c = 269.618γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
PDB_EXTRACTdata extraction
PHENIXrefinement
SCALEPACKdata scaling
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
American Heart AssociationUnited States12GRNT11920011
American Heart AssociationUnited States14GRNT20390021
American Heart AssociationUnited States16PRE30180007
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited States5R01AI106987
National Institutes of Health/National Heart, Lung, and Blood InstituteUnited StatesT32HL007751

Revision History 

  • Version 1.0: 2018-12-26
    Type: Initial release