6EAS

Co-crystal of pseudokinase DRIK1 (drought responsive inactive kinase 1) bound to ENMD-2076


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Co-crystal of pseudokinase DRIK1 with ENMD-2076

Aquino, B.Counago, R.M.Fala, A.M.Massirer, K.B.Elkins, J.M.Arruda, P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
drought responsive inactive kinase 1
A
308Zea maysMutation(s): 0 
Gene Names: 100191492
Find proteins for C0P4K9 (Zea mays)
Go to UniProtKB:  C0P4K9
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
J3A
Query on J3A

Download SDF File 
Download CCD File 
A
6-(4-methylpiperazin-1-yl)-N-(5-methyl-1H-pyrazol-3-yl)-2-[(E)-2-phenylethenyl]pyrimidin-4-amine
C21 H25 N7
BLQYVHBZHAISJM-CMDGGOBGSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.207 
  • Space Group: P 21 2 21
Unit Cell:
Length (Å)Angle (°)
a = 60.506α = 90.00
b = 61.790β = 90.00
c = 65.383γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
PHASERphasing
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Sao Paulo Research FoundationBrazil13/50724-5

Revision History 

  • Version 1.0: 2018-08-22
    Type: Initial release