6E6M

Crystal structure of human cellular retinol-binding protein 1 in complex with cannabidiorcin (CBDO)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of human cellular retinol binding protein 1 in complex with abnormal-cannabidiol

Silvaroli, J.A.Widjaja-Adhi, M.A.K.Chelstowska, S.Trischman, T.Horwitz, S.Banerjee, S.Kiser, P.D.Golczak, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Retinol-binding protein 1
A, B, C
140Homo sapiensMutation(s): 0 
Gene Names: RBP1 (CRBP1)
Find proteins for P09455 (Homo sapiens)
Go to Gene View: RBP1
Go to UniProtKB:  P09455
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
8CB
Query on 8CB

Download SDF File 
Download CCD File 
A, B, C
(1'R,2'R)-4,5'-dimethyl-2'-(prop-1-en-2-yl)-1',2',3',4'-tetrahydro[1,1'-biphenyl]-2,6-diol
cannabidiorcin, CBDO
C17 H22 O2
GKVOVXWEBSQJPA-UONOGXRCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.166 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 37.210α = 90.00
b = 93.040β = 90.00
c = 119.820γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
MOSFLMdata reduction
PHASERphasing
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Eye InstituteUnited StatesEY023948

Revision History 

  • Version 1.0: 2019-02-13
    Type: Initial release
  • Version 1.1: 2019-03-13
    Type: Data collection