6E2H

Crystal structure of human Ash2L (SPRY domain and SDI motif) in complex with full length DPY-30


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.236 Å
  • R-Value Free: 0.200 
  • R-Value Work: 0.177 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural Analysis of the Ash2L/Dpy-30 Complex Reveals a Heterogeneity in H3K4 Methylation.

Haddad, J.F.Yang, Y.Takahashi, Y.H.Joshi, M.Chaudhary, N.Woodfin, A.R.Benyoucef, A.Yeung, S.Brunzelle, J.S.Skiniotis, G.Brand, M.Shilatifard, A.Couture, J.F.

(2018) Structure 26: 1594


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Set1/Ash2 histone methyltransferase complex subunit ASH2
D
214Homo sapiensMutation(s): 0 
Gene Names: ASH2L (ASH2L1)
Find proteins for Q9UBL3 (Homo sapiens)
Go to Gene View: ASH2L
Go to UniProtKB:  Q9UBL3
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Protein dpy-30 homolog
E, F
100Homo sapiensMutation(s): 0 
Gene Names: DPY30
Find proteins for Q9C005 (Homo sapiens)
Go to Gene View: DPY30
Go to UniProtKB:  Q9C005
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.236 Å
  • R-Value Free: 0.200 
  • R-Value Work: 0.177 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 103.011α = 90.00
b = 103.011β = 90.00
c = 129.138γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
Aimlessdata scaling
PHENIXrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Canadian Institutes of Health ResearchCanada--

Revision History 

  • Version 1.0: 2018-08-08
    Type: Initial release
  • Version 1.1: 2018-10-17
    Type: Data collection, Database references
  • Version 1.2: 2018-12-19
    Type: Data collection, Database references