6DZS

Mycobacterial homoserine dehydrogenase ThrA in complex with NADP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of mycobacterial homoserine dehydrogenase ThrA

Chaton, C.T.Rodriguez, E.S.Korotkov, K.V.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Homoserine dehydrogenase
A, B, C, D
441Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)Mutation(s): 0 
Gene Names: hom
EC: 1.1.1.3
Find proteins for K5BJC9 (Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849))
Go to UniProtKB:  K5BJC9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAP
Query on NAP

Download SDF File 
Download CCD File 
A, B, C, D
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.206 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 93.800α = 90.00
b = 110.320β = 91.83
c = 97.530γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
PDB_EXTRACTdata extraction
XDSdata reduction
XSCALEdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesP20GM103486
National Institutes of Health/National Institute of General Medical SciencesUnited StatesP30GM110787

Revision History 

  • Version 1.0: 2018-07-18
    Type: Initial release