6DKS

Structure of the Rbpj-SHARP-DNA Repressor Complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.78 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.195 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

X-ray structure of the RBPJ-SHARP-DNA corepressor complex.

Kovall, R.A.Yuan, Z.Vanderwielen, B.D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Recombining binding protein suppressor of hairless
C, G
422Mus musculusMutation(s): 0 
Gene Names: Rbpj (Igkjrb1, Igkrsbp, Rbpsuh)
Find proteins for P31266 (Mus musculus)
Go to UniProtKB:  P31266
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Maltose/maltodextrin-binding periplasmic protein
D, H
407Escherichia coli O157:H7Mutation(s): 0 
Gene Names: malE
Find proteins for P0AEY0 (Escherichia coli O157:H7)
Go to UniProtKB:  P0AEY0
Entity ID: 1
MoleculeChainsLengthOrganism
DNA (5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3')A,E15Mus musculus
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3')B,F15Mus musculus
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MAL
Query on MAL

Download SDF File 
Download CCD File 
D, H
MALTOSE
C12 H22 O11
GUBGYTABKSRVRQ-ASMJPISFSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.78 Å
  • R-Value Free: 0.228 
  • R-Value Work: 0.195 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 54.450α = 90.00
b = 231.570β = 99.88
c = 90.260γ = 90.00
Software Package:
Software NamePurpose
BUSTERrefinement
PHENIXphasing
XDSdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Cancer InstituteUnited StatesNCI CA178974

Revision History 

  • Version 1.0: 2019-01-02
    Type: Initial release
  • Version 1.1: 2019-02-20
    Type: Author supporting evidence, Data collection