Macromolecule Content

Total Structure Weight: 9.69 kDa
Atom Count: 689
Modelled Residue Count: 75
Deposited Residue Count: 78
Unique protein chains: 1

6DE9

mitoNEET bound to furosemide

DOI: 10.2210/pdb6DE9/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2018-05-11 Released: 2019-05-15
Deposition Author(s): Robart, A.R., Geldenhuys, W.J.
Funding Organization(s): National Institutes of Health/National Center for Advancing Translational Sciences (NIH/NCATS)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free: 0.221
R-Value Work: 0.200
R-Value Observed: 0.202

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

mitoNEET bound to furosemide

Geldenhuys, W.J., Iwasaki, T., Nunez, R.A.A., Nair, R.R., Konkle, M.E., Menze, M.A., Long, T.E.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CDGSH iron-sulfur domain-containing protein 1	A	78	Homo sapiens	Mutation(s): 0 Gene Names: CISD1, C10orf70, ZCD1, MDS029
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NZ45 (Homo sapiens) Explore Q9NZ45 Go to UniProtKB: Q9NZ45
PHAROS: Q9NZ45 GTEx: ENSG00000122873
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
FUN Query on FUN Download Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A]	C [auth A]	5-(AMINOSULFONYL)-4-CHLORO-2-[(2-FURYLMETHYL)AMINO]BENZOIC ACID C₁₂ H₁₁ Cl N₂ O₅ S ZZUFCTLCJUWOSV-UHFFFAOYSA-N		Ligand Interaction
FES Query on FES Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A]	B [auth A]	FE2/S2 (INORGANIC) CLUSTER Fe₂ S₂ NIXDOXVAJZFRNF-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free: 0.221
R-Value Work: 0.200
R-Value Observed: 0.202
Space Group: I 4₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.83	α = 90
b = 58.83	β = 90
c = 176.75	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
MOSFLM	data reduction
Aimless	data scaling
PDB_EXTRACT	data extraction
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Deposited Date: 2018-05-11
Released Date: 2019-05-15

Deposition Author(s):

Geldenhuys, W.J.

Funding Organization	Location	Grant Number
National Institutes of Health/National Center for Advancing Translational Sciences (NIH/NCATS)	United States	--

Revision History (Full details and data files)

Version 1.0: 2019-05-15
Type: Initial release
Version 1.1: 2019-12-04
Changes: Author supporting evidence

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.