6DDA

Nurr1 Covalently Modified by a Dopamine Metabolite


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.294 
  • R-Value Work: 0.250 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Nurr1 Covalently Modified by a Dopamine Metabolite

Bruning, J.M.Holton, J.M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nuclear receptor subfamily 4 group A member 2
B, C
272Homo sapiensMutation(s): 0 
Gene Names: NR4A2 (NOT, NURR1, TINUR)
Find proteins for P43354 (Homo sapiens)
Go to Gene View: NR4A2
Go to UniProtKB:  P43354
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Nuclear receptor subfamily 4 group A member 2
A
272Homo sapiensMutation(s): 0 
Gene Names: NR4A2 (NOT, NURR1, TINUR)
Find proteins for P43354 (Homo sapiens)
Go to Gene View: NR4A2
Go to UniProtKB:  P43354
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download SDF File 
Download CCD File 
A, B, C
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
BR
Query on BR

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Download CCD File 
A, C
BROMIDE ION
Br
CPELXLSAUQHCOX-UHFFFAOYSA-M
 Ligand Interaction
G7J
Query on G7J

Download SDF File 
Download CCD File 
A, B, C
5-hydroxy-1,2-dihydro-6H-indol-6-one
C8 H7 N O2
RWEUJNADLANQCX-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
OCS
Query on OCS
A
L-PEPTIDE LINKINGC3 H7 N O5 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.294 
  • R-Value Work: 0.250 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 80.586α = 90.00
b = 80.586β = 90.00
c = 225.805γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
PHENIXphasing
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
United States--

Revision History 

  • Version 1.0: 2019-03-20
    Type: Initial release