6DB4

JAK3 with Cyanamide CP34


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.662 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.185 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Identification of Cyanamide-Based Janus Kinase 3 (JAK3) Covalent Inhibitors.

Casimiro-Garcia, A.Trujillo, J.I.Vajdos, F.F.Juba, B.M.Banker, M.E.Aulabaugh, A.Balbo, P.Bauman, J.Chrencik, J.Coe, J.W.Czerwinski, R.M.Dowty, M.E.Knafels, J.D.Kwon, S.Leung, L.Liang, S.Robinson, R.P.Telliez, J.B.Unwalla, R.Yang, X.Thorarensen, A.

(2018) J. Med. Chem. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tyrosine-protein kinase JAK3
A
321Homo sapiensMutation(s): 1 
Gene Names: JAK3
EC: 2.7.10.2
Find proteins for P52333 (Homo sapiens)
Go to Gene View: JAK3
Go to UniProtKB:  P52333
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
G4Y
Query on G4Y

Download SDF File 
Download CCD File 
A
N-[(1S)-6-(5-phenyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-2,3-dihydro-1H-inden-1-yl]imidoformamide
C22 H19 N5
HLJVDQSXUUSDJP-IBGZPJMESA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.662 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.185 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 48.142α = 90.00
b = 75.137β = 90.00
c = 88.558γ = 90.00
Software Package:
Software NamePurpose
TRUNCATEdata reduction
BUSTERrefinement
PDB_EXTRACTdata extraction
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-05-02 
  • Released Date: 2018-11-28 
  • Deposition Author(s): Vajdos, F.F.

Revision History 

  • Version 1.0: 2018-11-28
    Type: Initial release