Biological Assembly 1  

 3D View: Structure | Ligand Interaction

Standalone Viewers  
Protein Workshop | Ligand Explorer

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 79-mer - ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZa Pseudo Symmetry: Asymmetric - C1 
Pseudo Stoichiometry: Hetero 79-mer -A2BCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: authors reported there is no experimental evidence

Macromolecule Content

• Total Structure Weight: 3493885.00 
• Atom Count: 227188 
• Residue Count: 19933 
• Unique protein chains: 79
• Unique nucleic acid chains: 6

6D9J

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.

• DOI: 10.2210/pdb6D9J/pdb
• EMDataBank: EMD-7836

• Classification: RIBOSOME
• Organism(s): Oryctolagus cuniculus, Homo sapiens, Escherichia coli, Cricket paralysis virus
• Expression System: Escherichia coli


• Deposited: 2018-04-30 Released: 2018-06-06 
• Deposition Author(s): Pisareva, V.P., Pisarev, A.V., Fernandez, I.S.
• Funding Organization(s): National Institutes of Health/National Human Genome Research Institute 

---

Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.2 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Dual tRNA mimicry in the Cricket Paralysis Virus IRES uncovers an unexpected similarity with the Hepatitis C Virus IRES.

Pisareva, V.P., Pisarev, A.V., Fernandez, I.S.

(2018) Elife 7: --

• PubMed: 29856316 
• DOI: 10.7554/eLife.34062
• Primary Citation of Related Structures:  
  6D90


• PubMed Abstract: 
  

Co-opting the cellular machinery for protein production is a compulsory requirement for viruses. The Cricket Paralysis Virus employs an Internal Ribosomal Entry Site (CrPV-IRES) to express its structural genes in the late stage of infection. Ribosome hijacking is achieved by a sophisticated use of molecular mimicry to tRNA and mRNA, employed to manipulate intrinsically dynamic components of the ribosome. Binding and translocation through the ribosome is required for this IRES to initiate translation. We report two structures, solved by single particle electron cryo-microscopy (cryoEM), of a double translocated CrPV-IRES with aminoacyl-tRNA in the peptidyl site (P site) of the ribosome. CrPV-IRES adopts a previously unseen conformation, mimicking the acceptor stem of a canonical E site tRNA. The structures suggest a mechanism for the positioning of the first aminoacyl-tRNA shared with the distantly related Hepatitis C Virus IRES.

---

Organizational Affiliation: 

Department of Cell Biology, SUNY Downstate Medical Center, Brooklyn, United States.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
uL2	A	257	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL8
Find proteins for G1TT27 (Oryctolagus cuniculus) Go to Gene View: RPL8 Go to UniProtKB:  G1TT27

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details
uL3	B	403	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL3
Find proteins for G1TL06 (Oryctolagus cuniculus) Go to Gene View: RPL3 Go to UniProtKB:  G1TL06

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details
uL4	C	392	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL4
Find proteins for G1SVW5 (Oryctolagus cuniculus) Go to Gene View: RPL4 Go to UniProtKB:  G1SVW5

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details
uL18	D	297	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL5
Find proteins for G1SYJ6 (Oryctolagus cuniculus) Go to Gene View: RPL5 Go to UniProtKB:  G1SYJ6

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details
eL6	E	291	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL6
Find proteins for G1SKF7 (Oryctolagus cuniculus) Go to Gene View: RPL6 Go to UniProtKB:  G1SKF7

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details
uL30	F	249	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL7
Find proteins for G1SV32 (Oryctolagus cuniculus) Go to Gene View: RPL7 Go to UniProtKB:  G1SV32

Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details
eL8	G	242	Oryctolagus cuniculus	Mutation(s): 0
Find proteins for G1STW0 (Oryctolagus cuniculus) Go to UniProtKB:  G1STW0

Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details
uL6	H	192	Oryctolagus cuniculus	Mutation(s): 0
Find proteins for G1TX33 (Oryctolagus cuniculus) Go to UniProtKB:  G1TX33

Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details
uL16	I	214	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL10
Find proteins for B7NZQ2 (Oryctolagus cuniculus) Go to Gene View: RPL10 Go to UniProtKB:  B7NZQ2

Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details
uL11	J	178	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL11
Find proteins for G1TUB8 (Oryctolagus cuniculus) Go to Gene View: RPL11 Go to UniProtKB:  G1TUB8

Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details
eL13	L	211	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100342098
Find proteins for G1TPV0 (Oryctolagus cuniculus) Go to UniProtKB:  G1TPV0

Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details
eL14	M	198	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL14
Find proteins for U3KNW6 (Oryctolagus cuniculus) Go to Gene View: RPL14 Go to UniProtKB:  U3KNW6

Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details
eL15	N	204	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL15 (LOC100358370)
Find proteins for G1T0C1 (Oryctolagus cuniculus) Go to Gene View: RPL15 Go to UniProtKB:  G1T0C1

Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details
uL13	O	198	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details
uL22	P	187	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC108175352
Find proteins for G1TVT6 (Oryctolagus cuniculus) Go to UniProtKB:  G1TVT6

Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details
eL18	Q	187	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details
eL19	R	181	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details
eL20	S	176	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details
eL21	T	160	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL21
Find proteins for G1SHQ2 (Oryctolagus cuniculus) Go to Gene View: RPL21 Go to UniProtKB:  G1SHQ2

Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details
eL22	U	99	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details
uL14	V	140	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL23
Find proteins for G1T6D1 (Oryctolagus cuniculus) Go to Gene View: RPL23 Go to UniProtKB:  G1T6D1

Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details
eL24	W	157	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL24
Find proteins for G1SE28 (Oryctolagus cuniculus) Go to Gene View: RPL24 Go to UniProtKB:  G1SE28

Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details
eL23	X	156	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC108177184 (LOC108177974)
Find proteins for G1SE76 (Oryctolagus cuniculus) Go to UniProtKB:  G1SE76

Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details
uL24	Y	145	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL26
Find proteins for G1SQH0 (Oryctolagus cuniculus) Go to Gene View: RPL26 Go to UniProtKB:  G1SQH0

Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details
eL27	Z	136	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100356974 (RPL27)
Find proteins for G1TXF6 (Oryctolagus cuniculus) Go to UniProtKB:  G1TXF6

Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details
uL15	a	148	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL27A
Find proteins for G1SNY0 (Oryctolagus cuniculus) Go to Gene View: RPL27A Go to UniProtKB:  G1SNY0

Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details
eL29	b	226	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL29
Find proteins for G1SGR6 (Oryctolagus cuniculus) Go to Gene View: RPL29 Go to UniProtKB:  G1SGR6

Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details
eL30	c	115	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL30
Find proteins for G1TDL2 (Oryctolagus cuniculus) Go to Gene View: RPL30 Go to UniProtKB:  G1TDL2

Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details
eL31	d	125	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL31
Find proteins for G1SHG0 (Oryctolagus cuniculus) Go to Gene View: RPL31 Go to UniProtKB:  G1SHG0

Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details
eL32	e	135	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL32
Find proteins for G1U437 (Oryctolagus cuniculus) Go to Gene View: RPL32 Go to UniProtKB:  G1U437

Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details
eL33	f	110	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL35A
Find proteins for G1SF08 (Oryctolagus cuniculus) Go to Gene View: RPL35A Go to UniProtKB:  G1SF08

Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details
eL34	g	126	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100354714
Find proteins for G1U945 (Oryctolagus cuniculus) Go to UniProtKB:  G1U945

Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details
eL35	h	123	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL35
Find proteins for G1SIT5 (Oryctolagus cuniculus) Go to Gene View: RPL35 Go to UniProtKB:  G1SIT5

Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details
eL36	i	105	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100348796
Find proteins for G1TTQ5 (Oryctolagus cuniculus) Go to UniProtKB:  G1TTQ5

Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details
eL37	j	97	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL37
Find proteins for U3KPD5 (Oryctolagus cuniculus) Go to Gene View: RPL37 Go to UniProtKB:  U3KPD5

Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details
eL38	k	69	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details
eL39	l	51	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100343258
Find proteins for G1TTN1 (Oryctolagus cuniculus) Go to UniProtKB:  G1TTN1

Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details
eL40	m	52	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details
eL41	n	25	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details
eL42	o	106	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100358069 (LOC100342087, LOC100350675, RPL36AL)
Find proteins for G1U344 (Oryctolagus cuniculus) Go to UniProtKB:  G1U344

Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details
eL43	p	92	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100351807
Find proteins for G1SY53 (Oryctolagus cuniculus) Go to UniProtKB:  G1SY53

Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details
eL28	r	137	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100358162
Find proteins for G1U7L1 (Oryctolagus cuniculus) Go to UniProtKB:  G1U7L1

Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details
uL10	s	303	Oryctolagus cuniculus	Mutation(s): 0
Find proteins for G1U6N2 (Oryctolagus cuniculus) Go to UniProtKB:  G1U6N2

Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details
uL11	t	195	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL12
Find proteins for G1SMR7 (Oryctolagus cuniculus) Go to Gene View: RPL12 Go to UniProtKB:  G1SMR7

Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details
uL1	K	217	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPL10A
Find proteins for G1SKZ8 (Oryctolagus cuniculus) Go to Gene View: RPL10A Go to UniProtKB:  G1SKZ8

Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details
uS2	BB	217	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details
eS1	CC	264	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS3A (LOC100342838, LOC100348981)
Find proteins for G1SS70 (Oryctolagus cuniculus) Go to Gene View: RPS3A Go to UniProtKB:  G1SS70

Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details
uS5	DD	221	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details
uS3	EE	281	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS3
Find proteins for G1TNM3 (Oryctolagus cuniculus) Go to Gene View: RPS3 Go to UniProtKB:  G1TNM3

Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details
eS4	FF	262	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details
uS7	GG	204	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS5
Find proteins for G1TFM5 (Oryctolagus cuniculus) Go to Gene View: RPS5 Go to UniProtKB:  G1TFM5

Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details
eS6	HH	249	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100339133 (RPS6)
Find proteins for G1TM55 (Oryctolagus cuniculus) Go to UniProtKB:  G1TM55

Entity ID: 57
Molecule	Chains	Sequence Length	Organism	Details
eS7	II	194	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS7
Find proteins for G1SVB0 (Oryctolagus cuniculus) Go to Gene View: RPS7 Go to UniProtKB:  G1SVB0

Entity ID: 58
Molecule	Chains	Sequence Length	Organism	Details
eS8	JJ	206	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100352057
Find proteins for G1TJW1 (Oryctolagus cuniculus) Go to UniProtKB:  G1TJW1

Entity ID: 59
Molecule	Chains	Sequence Length	Organism	Details
uS4	KK	194	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS9
Find proteins for B7NZS8 (Oryctolagus cuniculus) Go to Gene View: RPS9 Go to UniProtKB:  B7NZS8

Entity ID: 60
Molecule	Chains	Sequence Length	Organism	Details
eS10	LL	149	Oryctolagus cuniculus	Mutation(s): 0
Find proteins for G1U0Y5 (Oryctolagus cuniculus) Go to UniProtKB:  G1U0Y5

Entity ID: 61
Molecule	Chains	Sequence Length	Organism	Details
uS17	MM	158	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100347468
Find proteins for G1TRM4 (Oryctolagus cuniculus) Go to UniProtKB:  G1TRM4

Entity ID: 62
Molecule	Chains	Sequence Length	Organism	Details
eS12	NN	132	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS12
Find proteins for G1SFR8 (Oryctolagus cuniculus) Go to Gene View: RPS12 Go to UniProtKB:  G1SFR8

Entity ID: 63
Molecule	Chains	Sequence Length	Organism	Details
uS15	OO	151	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS13
Find proteins for G1SP51 (Oryctolagus cuniculus) Go to Gene View: RPS13 Go to UniProtKB:  G1SP51

Entity ID: 64
Molecule	Chains	Sequence Length	Organism	Details
uS11	PP	151	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100337691 (LOC100351184)
Find proteins for G1U472 (Oryctolagus cuniculus) Go to UniProtKB:  G1U472

Entity ID: 65
Molecule	Chains	Sequence Length	Organism	Details
uS19	QQ	145	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC103349305
Find proteins for G1U0Q2 (Oryctolagus cuniculus) Go to UniProtKB:  G1U0Q2

Entity ID: 66
Molecule	Chains	Sequence Length	Organism	Details
uS9	RR	172	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS16
Find proteins for G1SGX4 (Oryctolagus cuniculus) Go to Gene View: RPS16 Go to UniProtKB:  G1SGX4

Entity ID: 67
Molecule	Chains	Sequence Length	Organism	Details
eS17	SS	135	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS17
Find proteins for G1TU13 (Oryctolagus cuniculus) Go to Gene View: RPS17 Go to UniProtKB:  G1TU13

Entity ID: 68
Molecule	Chains	Sequence Length	Organism	Details
uS13	TT	152	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100356144
Find proteins for G1TPG3 (Oryctolagus cuniculus) Go to UniProtKB:  G1TPG3

Entity ID: 69
Molecule	Chains	Sequence Length	Organism	Details
eS19	UU	145	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100345774
Find proteins for G1TN62 (Oryctolagus cuniculus) Go to UniProtKB:  G1TN62

Entity ID: 70
Molecule	Chains	Sequence Length	Organism	Details
uS10	VV	119	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100341365
Find proteins for G1SIZ2 (Oryctolagus cuniculus) Go to UniProtKB:  G1SIZ2

Entity ID: 71
Molecule	Chains	Sequence Length	Organism	Details
eS21	WW	83	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 72
Molecule	Chains	Sequence Length	Organism	Details
uS8	XX	130	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS15A
Find proteins for G1TG89 (Oryctolagus cuniculus) Go to Gene View: RPS15A Go to UniProtKB:  G1TG89

Entity ID: 73
Molecule	Chains	Sequence Length	Organism	Details
uS12	YY	143	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS23
Find proteins for G1SZ47 (Oryctolagus cuniculus) Go to Gene View: RPS23 Go to UniProtKB:  G1SZ47

Entity ID: 74
Molecule	Chains	Sequence Length	Organism	Details
eS24	ZZ	134	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS24
Find proteins for G1T3D8 (Oryctolagus cuniculus) Go to Gene View: RPS24 Go to UniProtKB:  G1T3D8

Entity ID: 75
Molecule	Chains	Sequence Length	Organism	Details
eS25	aa	125	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS25
Find proteins for G1TDB3 (Oryctolagus cuniculus) Go to Gene View: RPS25 Go to UniProtKB:  G1TDB3

Entity ID: 76
Molecule	Chains	Sequence Length	Organism	Details
eS26	bb	101	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 77
Molecule	Chains	Sequence Length	Organism	Details
eS27	cc	84	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100345694 (LOC100345044, LOC100348261, RPS27)
Find proteins for G1TZ76 (Oryctolagus cuniculus) Go to UniProtKB:  G1TZ76

Entity ID: 78
Molecule	Chains	Sequence Length	Organism	Details
eS28	dd	69	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RPS28
Find proteins for G1TIB4 (Oryctolagus cuniculus) Go to Gene View: RPS28 Go to UniProtKB:  G1TIB4

Entity ID: 79
Molecule	Chains	Sequence Length	Organism	Details
eS29	ee	56	N/A	Mutation(s): 0
Protein Feature View is not available: No corresponding UniProt sequence found.

Entity ID: 80
Molecule	Chains	Sequence Length	Organism	Details
eS30	ff	133	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: FAU
Find proteins for G1T8A2 (Oryctolagus cuniculus) Go to Gene View: FAU Go to UniProtKB:  G1T8A2

Entity ID: 81
Molecule	Chains	Sequence Length	Organism	Details
eS31	gg	156	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: LOC100348379
Find proteins for G1SK22 (Oryctolagus cuniculus) Go to UniProtKB:  G1SK22

Entity ID: 82
Molecule	Chains	Sequence Length	Organism	Details
RACK1	hh	317	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: RACK1
Find proteins for G1SJB4 (Oryctolagus cuniculus) Go to Gene View: RACK1 Go to UniProtKB:  G1SJB4

Entity ID: 84
Molecule	Chains	Sequence Length	Organism	Details
eEF2	9	856	Homo sapiens	Mutation(s): 0  Gene Names: EEF2 (EF2)
Find proteins for P13639 (Homo sapiens) Go to Gene View: EEF2 Go to UniProtKB:  P13639

Entity ID: 45
Molecule	Chains	Length	Organism
28S rRNA	5	3594	Oryctolagus cuniculus

Entity ID: 46
Molecule	Chains	Length	Organism
5S rRNA	7	119	Oryctolagus cuniculus

Entity ID: 47
Molecule	Chains	Length	Organism
5.8S rRNA	8	151	Oryctolagus cuniculus

Entity ID: 49
Molecule	Chains	Length	Organism
18S rRNA	2	1697	Oryctolagus cuniculus

Entity ID: 83
Molecule	Chains	Length	Organism
P-site tRNA	3	87	Escherichia coli

Entity ID: 85
Molecule	Chains	Length	Organism
CrPV IRES	4	190	Cricket paralysis virus

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
ZN	2, bb, gg, p	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG	5	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.2 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Deposited Date: 2018-04-30 
• Released Date: 2018-06-06 
• Deposition Author(s): Pisareva, V.P., Pisarev, A.V., Fernandez, I.S.

---

Funding Organization	Location	Grant Number
National Institutes of Health/National Human Genome Research Institute	United States	GM097014

Revision History 

• Version 1.0: 2018-06-06
  Type: Initial release
• Version 1.1: 2018-06-13
  Type: Data collection, Database references