Superoxide dismutase SodCI of Salmonella enterica serovar Typhimurium at 1.6 Angstrom resolution
Newhouse IX, P.W., Satyshur, K.A., Forest, K.T., Slauch, J.M.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Superoxide dismutase [Cu-Zn] 1 | A [auth B], B [auth D], C, D [auth A] | 165 | Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 | Mutation(s): 0  Gene Names: sodC1, sodC, STM474_1035 EC: 1.15.1.1 | |
UniProt | |||||
Find proteins for E8XDJ8 (Salmonella typhimurium (strain 4/74)) Explore E8XDJ8  Go to UniProtKB:  E8XDJ8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | E8XDJ8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | E [auth B], G [auth D], I [auth C], K [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CU Query on CU | F [auth B], H [auth D], J [auth C], L [auth A] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.53 | α = 90 |
b = 68.571 | β = 90 |
c = 122.172 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
---|---|---|
National Science Foundation (NSF, United States) | United States | IOS 1353674 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | T32 GM007215 |