6CYF

PcrV fragment with bound Fab


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.78 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.215 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Pseudomonas aeruginosa PcrV and Psl, the Molecular Targets of Bispecific Antibody MEDI3902, Are Conserved Among Diverse Global Clinical Isolates.

Tabor, D.E.Oganesyan, V.Keller, A.E.Yu, L.McLaughlin, R.E.Song, E.Warrener, P.Rosenthal, K.Esser, M.Qi, Y.Ruzin, A.Stover, C.K.DiGiandomenico, A.

(2018) J. Infect. Dis. 218: 1983-1994


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Type III secretion system protein
A, B, I, Q
128Pseudomonas aeruginosaMutation(s): 0 
Gene Names: pcrV
Find proteins for M4Q7H6 (Pseudomonas aeruginosa)
Go to UniProtKB:  M4Q7H6
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
IgG1 antibody, kappa light chain
C, L, E, T
214N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
IgG1 antibody, heavy chain fragment
D, M, F, U
227N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.78 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.215 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 80.686α = 90.00
b = 160.384β = 90.00
c = 260.681γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
HKL-2000data reduction
MOLREPphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-04-05 
  • Released Date: 2018-08-01 
  • Deposition Author(s): Oganesyan, V.

Revision History 

  • Version 1.0: 2018-08-01
    Type: Initial release
  • Version 1.1: 2018-10-10
    Type: Data collection, Structure summary
  • Version 1.2: 2018-11-21
    Type: Data collection, Database references, Structure summary